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Publications from Vlad Ladizhansky


L.S. Brown, V. Ladizhansky, 2015. Membrane proteins in their native habitat as seen by solid-state NMR spectroscopy, Prot. Sci., accepted.

M.E. Ward, S. Wang, R. Munro, E. Ritz, I. Hung, P. L.Gor’kov, Y. Jiang, H. Liang, L. S. Brown, and V. Ladizhansky , 2015. In Situ Structural Studies of Anabaena Sensory Rhodopsin in the E. coli Membrane Biophys. J., 108, 1683. Highlighted in “New and Notable”

M.E. Ward, L.S. Brown, V. Ladizhansky, 2015. Advanced solid-state NMR techniques for characterization of membrane protein structure and dynamics: Application to Anabaena Sensory Rhodopsin. J. Magn. Reson., 253, 119.

S. Wang, V. Ladizhansky, 2014. Recent advances in magic angle spinning solid state NMR of membrane proteins. Prog. Nucl. Magn. Reson. Spectrosc., 82, 1.

V. Ladizhansky, 2014. Recent advances in magic angle spinning solid-state NMR of proteins. Isr. J. Chem., 54, 86.

D.B. Good, S. Wang, M.E. Ward, J. O. Struppe, L.S. Brown, J. Lewandowski, V. Ladizhansky, 2014. Conformational dynamics of a seven transmembrane helical protein Anabaena Sensory Rhodopsin probed by solid-state NMR. J. Am. Chem. Soc., 136, 2833. Article selected for JACS Spotlights and was featured in the virtual issue on protein dynamics

L. Kuang, D.A. Fernandes, M. O'Halloran, W. Zheng, Y. Jiang, V. Ladizhansky, L.S. Brown, H. Liang, 2014. "Frozen" Block Copolymer Nanomembranes with Light-Driven Proton Pumping Performance.ACS Nano, 28, 53

M.E.Ward, S. Wang, S. Krishnamurthy, H. Hutchins, M. Fey, L.S. Brown, V. Ladizhansky, 2014. High-resolution paramagnetically enhanced solid-state NMR spectroscopy of membrane proteins at fast magic angle spinning. J. Biomol. NMR, 58, 37.

G.T. Debelouchina, M.J. Bayro, A.W. Fitzpatrick, V. Ladizhansky, M.T. Colvin, M.A. Caporini, C.P. Jaroniec, V.S. Bajaj, M. Rosay, C.E. Macphee,M. Vendruscolo, W.E. Maas, C.M. Dobson, R.G. Griffin, 2013 .Higher Order Amyloid Fibril Structure by MAS NMR and DNP Spectroscopy. J. Am. Chem. Soc, 135, 19237.

S. Wang, R.A. Munro, L. Shi, I. Kawamura, T. Okitsu, A. Wada, S.Y. Kim, K.H. Jung, L.S. Brown, V. Ladizhansky, 2013. Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein. Nature Methods, 10, 1007.

A.W. Fitzpatrick, G.T. Debelouchina, M.J. Bayro, D.K. Clare, M.A. Caporini, V.S. Bajaj, C.P. Jaroniec, L. Wang, V. Ladizhansky, S.A. MN|ller, C.E. MacPhee, C.A. Waudby, H.R. Mott, A. De Simone,T.P. Knowles, H.R. Saibil,M. Vendruscolo, E.V. Orlova, R.G. Griffin, C.M. Dobson, 2013. Atomic structure and hierarchical assembly of a cross-beta amyloid fibril. Proc Natl Acad Sci U S A., 110, 5468.

S. Emami, Y. Fan, R. Munro, V. Ladizhansky, L.S. Brown, 2013. Yeast-expressed human membrane protein aquaporin-1 yields excellent resolution of solid-state MAS NMR spectra. J Biomol NMR. 55, 147.

S. Wang, R.A. Munro, S.Y. Kim, K.H. Jung, L.S. Brown, V. Ladizhansky, 2012. Paramagnetic relaxation enhancement reveals oligomerization interface of a membrane protein. J Am Chem Soc. 2012, 134, 16995.

S. Wang, L. Shi, T. Okitsu, A. Wada, L.S. Brown, V. Ladizhansky, 2013. Solid-state NMR (13)C and (15)N resonance assignments of a seven-transmembrane helical protein Anabaena Sensory Rhodopsin. Biomol NMR Assign, 7, 253.

L. Shi, V. Ladizhansky, 2012. Magic angle spinning solid-state NMR experiments for structural characterization of proteins. Methods Mol Biol. 895, 153.

M.E. Ward, L. Shi, E.M. Lake, S.Krishnamurthy,H. Hutchins, L.S. Brown, V. Ladizhansky, 2011. Proton Detected Solid-State NMR Reveals Intramembrane Polar Networks in a Seven-Helical Transmembrane Protein Proteorhodopsin. J. Am. Chem. Soc., 133, 17434-17443

S. Wang, L. Shi, I. Kawamura, L.S. Brown, V. Ladizhansky, 2011. Site-Specific Solid-State NMR Detection of Hydrogen-Deuterium Exchange Reveals Conformational Changes in a 7-Helical Transmembrane Protein. Biophys. J. (Biophys. Letter), 101, L23.

S. Wang, S.Y. Kim, K.-H. Jung, V. Ladizhansky, L.S. Brown, 2011. A Eukaryotic-Like Interaction of Suluble Cyanobacterial Sensory Rhodopsin Transducer with DNA. J. Mol. Biol.,411, 449.

L. Shi, I. Kawamura, K.-H. Jung, L. S. Brown, V. Ladizhansky, 2011. Molecular conformation of a seven-helical transmembrane photosensor in the lipid environment. Angew. Chemie Int. Ed., 50, 1302-1305.

Y. Fan, L. Shi, V. Ladizhansky, L.S. Brown, 2011. Uniform isotope labeling of a eukaryotic seven-transmembrane helical protein in yeast enables high-resolution solid-state NMR studies in the lipid environment. J Biomol NMR, 49, 151-161.

M.A. Ahmed, V.V. Bamm, G. Harauz, V. Ladizhansky, 2010. Solid-state NMR spectroscopy of membrane-associated myelin basic protein-conformation and dynamics of an immunodominant epitope, Biophys J. 99, 1247-1255.

R. Janik, E. Ritz, A. Gravelle, L. Shi, X. Peng, V. Ladizhansky, 2010. Interresidue carbonyl-carbonyl polarization transfer experiments in uniformly 13C,15N- labeled peptides and proteins. J. Magn. Reson., 203, 177-184.

D. S. Libich, M. A.M. Ahmed, L. Zhong, V. V. Bamm, V. Ladizhansky, and G. Harauz, 2010. Fuzzy complexes of myelin basic protein - NMR investigations of a polymorphic organizational linker of the central nervous system. Biochemistry and Cell Biology, 88, 143-155.

V. Ladizhansky, 2009. Torsion angle measurements for protein structure determination in press. In T. Polenova and A.E. McDermott (editors), "Encyclopedia of Magnetic Resonance" (NMR in Biochemistry and Biophysics) and a "Handbook on Biopolymers" (edited by R. E. Wasylishen and R. K. Harris). John Wiley & Sons, Ltd.

L. Shi, E. Lake, M. Ahmed, L.S. Brown and V. Ladizhansky, 2009. Solid-state NMR study of proteorhodopsin in the lipid environment: secondary structure and dynamics. BBA-Biomembranes, 1788, 2563-2574.

V. Ladizhansky, 2009. Homonuclear dipolar recoupling techniques for structure determination in uniformly 13C-labeled proteins. Solid State Nucl. Magn. Reson., 36, 119-28.

G. Harauz, V. Ladizhansky, J.M. Boggs, 2009. Structural polymorphism and multifunctionality of myelin basic protein, Biochemistry, 48, 8094-8104.

M. Aluas, C. Tripon, J.M. Griffin, X. Filip, V. Ladizhansky, R.G. Griffin, S.P. Brown, C. Filip, CHHC and 1H-1H Magnetization Exchange: Analysis by Experimental Solid-State NMR and 11-Spin Density-Matrix Simulations, Journal of Magnetic Resonance 199 (2009) 173-187. http://dx.doi.org/10.1016/j.jmr.2009.04.013

L. Shi, M.A.M. Ahmed, W. Zhang, G. Whited, L.S. Brown, V. Ladizhansky, Three-dimensional solid-state NMR study of a seven-helical integral membrane proton pump – structural insights, Journal of Molecular Biology 386 (2009) 1078-1093. http://dx.doi.org/10.1016/j.jmb.2009.01.011
M.A.M. Ahmed, V.V. Bamm, L. Shi, M. Steiner-Mosonyi, J.F. Dawson, L. Brown, G. Harauz, V. Ladizhansky, Induced Secondary Structure and Polymorphism in an Intrinsically Disordered Structural Linker of the CNS: Solid-State NMR and FTIR Spectroscopy of Myelin Basic Protein Bound to Actin, Biophysical Journal 96 (2009) 180-191. http://dx.doi.org/10.1016/j.bpj.2008.10.003

G. Harauz, V. Ladizhansky. Structure and dynamics of the myelin basic protein (MBP) family by solution and solid-state NMR. Chapter X (pp 196-231) in Joan M. Boggs (editor), Myelin Basic Protein, Series on Intrinsically Disordered Proteins (edited by V. Uversky). Nova Science Publishers, 2008.

L. Shi, X. Peng, M.A.M. Ahmed, D. Edwards, L.S. Brown. and V. Ladizhansky. Resolution enhancement by homonuclear J-decoupling: application to three-dimensional solid-state magic angle spinning NMR spectroscopy. Journal of Biomolecular NMR (2008) in press. http://dx.doi.org/10.1007/s10858-008-9233-7

Peng, Xiaohu; Libich, David; Janik, Rafal; Harauz, George; Ladizhansky, Vladimir. Dipolar Chemical Shift Correlation Spectroscopy for Homonuclear Carbon Distance Measurements in Proteins in the Solid State: Application to Structure Determination and Refinement. Journal of the American Chemical Society (2008), 130(1), 359-369.

Ahmed, Mumdooh A. M.; Bamm, Vladimir V.; Harauz, George; Ladizhansky, Vladimir. The BG21 Isoform of Golli Myelin Basic Protein Is Intrinsically Disordered with a Highly Flexible Amino-Terminal Domain. Biochemistry (2007), 46(34), 9700-9712.

Bamm, Vladimir V.; Ahmed, Mumdooh A. M.; Ladizhansky, Vladimir; Harauz, George. Purification and spectroscopic characterization of the recombinant BG21 isoform of murine golli myelin basic protein. Journal of Neuroscience Research (2007), 85(2), 272-284.

Janik, Rafal; Peng, Xiaohu; Ladizhansky, Vladimir. 13C-13C distance measurements in U-13C, 15N-labeled peptides using rotational resonance width experiment with a homogeneously broadened matching condition. Journal of Magnetic Resonance (2007), 188(1), 129-140.

Zhong, Ligang; Bamm, Vladimir V.; Ahmed, Mumdooh A. M.; Harauz, George; Ladizhansky, Vladimir. Solid-state NMR spectroscopy of 18.5 kDa myelin basic protein reconstituted with lipid vesicles: Spectroscopic characterisation and spectral assignments of solvent-exposed protein fragments. Biochimica et Biophysica Acta, Biomembranes (2007), 1768(12), 3193-3205.

Ladizhansky, Vladimir; Griffin, Robert G. Band-Selective Carbonyl to Aliphatic Side Chain 13C-13C Distance Measurements in U-13C,15N-Labeled Solid Peptides by Magic Angle Spinning NMR. Journal of the American Chemical Society (2004), 126(3), 948-958.

Ladizhansky, Vladimir; Jaroniec, Christopher P.; Diehl, Annette; Oschkinat, Hartmut; Griffin, Robert G. Measurement of Multiple .psi. Torsion Angles in Uniformly 13C,15N-Labeled .alpha.-Spectrin SH3 Domain Using 3D 15N-13C-13C-15N MAS Dipolar-Chemical Shift Correlation Spectroscopy. Journal of the American Chemical Society (2003), 125(22), 6827-6833.

Ladizhansky, V.; Vinogradov, E.; van Rossum, B.-J.; de Groot, H. J. M.; Vega, S. Multiple-spin effects in fast magic angle spinning Lee-Goldburg cross-polarization experiments in uniformly labeled compounds. Journal of Chemical Physics (2003), 118(12), 5547-5557.

Ramachandran, Ramesh; Ladizhansky, Vladimir; Bajaj, Vikram S.; Griffin, Robert G. 13C-13C Rotational Resonance Width Distance Measurements in Uniformly 13C-Labeled Peptides. Journal of the American Chemical Society (2003), 125(50), 15623-15629.

Ladizhansky, Vladimir; Veshtort, Mikhail; Griffin, Robert G. NMR determination of the torsion angle .psi. in .alpha.-helical peptides and proteins: the HCCN dipolar correlation experiment. Journal of Magnetic Resonance (2002), 154(2), 317-324.

Ladizhansky, V.; Vega, S. Doping of CdS nanoparticles by Co2+ ions studied by NMR. Journal of Physical Chemistry B (2000), 104(22), 5237-5241.

Ladizhansky, Vladimir; Vega, Shimon. Polarization transfer dynamics in Lee-Goldburg cross polarization nuclear magnetic resonance experiments on rotating solids. Journal of Chemical Physics (2000), 112(16), 7158-7168.

Ladizhansky, V.; Hodes, G.; Vega, S. Solid State NMR Study of Water Binding on the Surface of CdS Nanoparticles. Journal of Physical Chemistry B (2000), 104(9), 1939-1943.

Van Rossum, B.-J.; De Groot, C. P.; Ladizhansky, V.; Vega, S.; De Groot, H. J. M. A Method for Measuring Heteronuclear (1H-13C) Distances in High Speed MAS NMR. Journal of the American Chemical Society (2000), 122(14), 3465-3472.

Ladizhansky, V.; Lyahovitskaya, V.; Vega, S. 113Cd NMR study of transferred hyperfine interactions in the dilute magnetic semiconductors Cd1-xCoxS and Cd1-xFexS and impurity distribution in Cd0.994Co0.006S. Physical Review B: Condensed Matter and Materials Physics (1999), 60(11), 8097-8104.

Ladizhansky, V.; Hodes, G.; Vega, S. Surface Properties of Precipitated CdS Nanoparticles Studied by NMR. Journal of Physical Chemistry B (1998), 102(43), 8505-8509.

Ray, Siddharth; Ladizhansky, Vladimir; Vega, Shimon. Simulation of CPMAS signals at high spinning speeds. Journal of Magnetic Resonance (1998), 135(2), 427-434.

Ladizhansky, V.; Faraggi, A.; Lyahovitskaya, V.; Vega, S. NMR study of the diluted magnetic semiconductor alloys Cd1-xMnxSe, Cd1-xCoxSe, and Cd1-xFexSe. Physical Review B: Condensed Matter (1997), 56(11), 6712-6718.

 

 
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